Comprehensive RNA-seq Data Analysis

I have a set of raw FASTQ files from a personal research project and I want to take them all the way through to biological insight. My primary goal is to identify differentially expressed genes, and I already have both the reference genome and its matching GTF/GFF annotation ready for you... (Budget: ₹400 - ₹750 INR, Jobs: Bioinformatics, Computer Security, Data Analysis, Data Visualization, Linux)